ASCL.net

Astrophysics Source Code Library

Making codes discoverable since 1999

Searching for codes credited to 'Zuntz, Joe'

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[ascl:1303.002] emcee: The MCMC Hammer

emcee is an extensible, pure-Python implementation of Goodman & Weare's Affine Invariant Markov chain Monte Carlo (MCMC) Ensemble sampler. It's designed for Bayesian parameter estimation. The algorithm behind emcee has several advantages over traditional MCMC sampling methods and has excellent performance as measured by the autocorrelation time (or function calls per independent sample). One advantage of the algorithm is that it requires hand-tuning of only 1 or 2 parameters compared to $sim N^2$ for a traditional algorithm in an N-dimensional parameter space. Exploiting the parallelism of the ensemble method, emcee permits any user to take advantage of multiple CPU cores without extra effort.

[ascl:1409.012] CosmoSIS: Cosmological parameter estimation

CosmoSIS is a cosmological parameter estimation code. It structures cosmological parameter estimation to ease re-usability, debugging, verifiability, and code sharing in the form of calculation modules. Witten in python, CosmoSIS consolidates and connects existing code for predicting cosmic observables and maps out experimental likelihoods with a range of different techniques.

[ascl:1409.013] IM3SHAPE: Maximum likelihood galaxy shear measurement code for cosmic gravitational lensing

Im3shape forward-fits a galaxy model to each data image it is supplied with and reports the parameters of the best fitting model, including the ellipticity components. It uses the Discrete Fourier Transform (DFT) to render images of convolved galaxy profiles, calculates the maximum likelihood parameter values, and corrects for noise bias. IM3SHAPE is a modular C code with a significant amount of Python glue code to enable setting up new models and their options automatically.