Astrophysics Source Code Library

Making codes discoverable since 1999

Searching for codes credited to 'Wardle, Mark'

Tip! Refine or expand your search. Authors are sometimes listed as 'Smith, J. K.' instead of 'Smith, John' so it is useful to search for last names only. Note this is currently a simple phrase search.

[ascl:2108.013] AMOEBA: Automated Gaussian decomposition

AMOEBA (Automated Molecular Excitation Bayesian line-fitting Algorithm) employs a Bayesian approach to Gaussian decomposition, resulting in an objective and statistically robust identification of individual clouds along the line-of-sight. It uses the Python implementation of Goodman & Weare's Affine Invariant Markov chain Monte Carlo (MCMC) Ensemble sampler emcee (ascl:1303.002) to sample the posterior probability distribution and numerically evaluate the integrals required to compute the Bayes Factor. Amoeba takes as input a set of OH optical depth spectra and a set of expected brightness temperature spectra that are obtained by measuring the brightness temperature towards the bright background continuum source (the "on-source" observations), and in a pattern surrounding the continuum source (the "off-source" observations). Amoeba can also take as input a set of OH optical depth spectra only, and also allows input of an arbitrary number of spectra to be fit simultaneously.