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Astrophysics Source Code Library

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[ascl:1602.007] FilTER: Filament Trait-Evaluated Reconstruction

FilTER (Filament Trait-Evaluated Reconstruction) post-processes output from DisPerSE (ascl:1302.015 ) to produce a set of filaments that are well-defined and have measured properties (e.g. width), then cuts the profiles, fits and assesses them to reconstruct new filaments according to defined criteria.

[ascl:1808.006] Fips: An OpenGL based FITS viewer

FIPS is a cross-platform FITS viewer with a responsive user interface. Unlike other FITS viewers, FIPS uses GPU hardware via OpenGL to provide functionality such as zooming, panning and level adjustments. OpenGL 2.1 and later is supported. FIPS supports all 2D image formats except floating point formats on OpenGL 2.1. FITS image extension has basic limited support.

[ascl:1810.021] Firefly: Interactive exploration of particle-based data

Firefly provides interactive exploration of particle-based data in the browser. The user can filter, display vector fields, and toggle the visibility of their customizable datasets all on-the-fly. Different Firefly visualizations, complete with preconfigured data and camera view-settings, can be shared by URL. As Firefly is written in WebGL, it can be hosted online, though Firefly can also be used locally, without an internet connection. Firefly was developed with simulations of galaxy formation in mind but is flexible enough to display any particle-based data. Other features include a stereoscopic 3D picture mode and mobile compatibility.

[ascl:1202.014] FISA: Fast Integrated Spectra Analyzer

FISA (Fast Integrated Spectra Analyzer) permits fast and reasonably accurate age and reddening determinations for small angular diameter open clusters by using their integrated spectra in the (3600-7400) AA range and currently available template spectrum libraries. This algorithm and its implementation help to achieve astrophysical results in shorter times than from other methods. FISA has successfully been applied to integrated spectroscopy of open clusters, both in the Galaxy and in the Magellanic Clouds, to determine ages and reddenings.

[ascl:1010.070] Fisher.py: Fisher Matrix Manipulation and Confidence Contour Plotting

Fisher.py allows you to combine constraints from multiple experiments (e.g., weak lensing + supernovae) and add priors (e.g., a flat universe) simply and easily. Calculate parameter uncertainties and plot confidence ellipses. Fisher matrix expectations for several experiments are included as calculated by myself (time delays) and the Dark Energy Task Force (WL/SN/BAO/CL/CMB), or provide your own.

[ascl:1201.007] Fisher4Cast: Fisher Matrix Toolbox

The Fisher4Cast suite, which requires MatLab, provides a standard, tested tool set for general Fisher Information matrix prediction and forecasting for use in both research and education. The toolbox design is robust and modular, allowing for easy additions and adaptation while keeping the user interface intuitive and easy to use. Fisher4Cast is completely general but the default is coded for cosmology. It provides parameter error forecasts for cosmological surveys providing distance, Hubble expansion and growth measurements in a general, curved FLRW background.

[ascl:1609.004] FISHPACK: Efficient FORTRAN Subprograms for the Solution of Separable Elliptic Partial Differential Equations

The FISHPACK collection of Fortran77 subroutines solves second- and fourth-order finite difference approximations to separable elliptic Partial Differential Equations (PDEs). These include Helmholtz equations in cartesian, polar, cylindrical, and spherical coordinates, as well as more general separable elliptic equations. The solvers use the cyclic reduction algorithm. When the problem is singular, a least-squares solution is computed. Singularities induced by the coordinate system are handled, including at the origin r=0 in cylindrical coordinates, and at the poles in spherical coordinates.

[ascl:1609.005] FISHPACK90: Efficient FORTRAN Subprograms for the Solution of Separable Elliptic Partial Differential Equations

FISHPACK90 is a modernization of the original FISHPACK (ascl:1609.004), employing Fortran90 to slightly simplify and standardize the interface to some of the routines. This collection of Fortran programs and subroutines solves second- and fourth-order finite difference approximations to separable elliptic Partial Differential Equations (PDEs). These include Helmholtz equations in cartesian, polar, cylindrical, and spherical coordinates, as well as more general separable elliptic equations. The solvers use the cyclic reduction algorithm. When the problem is singular, a least-squares solution is computed. Singularities induced by the coordinate system are handled, including at the origin r=0 in cylindrical coordinates, and at the poles in spherical coordinates. Test programs are provided for the 19 solvers. Each serves two purposes: as a template to guide you in writing your own codes utilizing the FISHPACK90 solvers, and as a demonstration on your computer that you can correctly produce FISHPACK90 executables.

[ascl:1601.016] Fit Kinematic PA: Fit the global kinematic position-angle of galaxies

Fit kinematic PA measures the global kinematic position-angle (PA) from integral field observations of a galaxy stellar or gas kinematics; the code is available in IDL and Python.

[ascl:1609.015] FIT3D: Fitting optical spectra

FIT3D fits optical spectra to deblend the underlying stellar population and the ionized gas, and extract physical information from each component. FIT3D is focused on the analysis of Integral Field Spectroscopy data, but is not restricted to it, and is the basis of Pipe3D, a pipeline used in the analysis of datasets like CALIFA, MaNGA, and SAMI. It can run iteratively or in an automatic way to derive the parameters of a large set of spectra.

[ascl:1305.011] FITDisk: Cataclysmic Variable Accretion Disk Demonstration Tool

FITDisk models accretion disk phenomena using a fully three-dimensional hydrodynamics calculation, and data can either be visualized as they are computed or stored to hard drive for later playback at a fast frame rate. Simulations are visualized using OpenGL graphics and the viewing angle can be changed interactively. Pseudo light curves of simulated systems can be plotted along with the associated Fourier amplitude spectrum. It provides an easy to use graphical user interface as well as 3-D interactive graphics. The code computes the evolution of a CV accretion disk, visualizes results in real time, records and plays back simulations, and generates and plots pseudo light curves and associated power spectra. FITDisk is the Windows executable form of this software; its Fortran source code is also available as DiskSim (ascl:1811.013).

[ascl:1206.002] FITS Liberator: Image processing software

The ESA/ESO/NASA FITS Liberator makes it possible to process and edit astronomical science data in the FITS format to produce stunning images of the universe. Formerly a plugin for Adobe Photoshop, the current version of FITS Liberator is a stand-alone application and no longer requires Photoshop. This image processing software makes it possible to create color images using raw observations from a range of telescopes; the FITS Liberator continues to support the FITS and PDS formats, preferred by astronomers and planetary scientists respectively, which enables data to be processed from a wide range of telescopes and planetary probes, including ESO’s Very Large Telescope, the NASA/ESA Hubble Space Telescope, NASA’s Spitzer Space Telescope, ESA’s XMM–Newton Telescope and Cassini–Huygens or Mars Reconnaissance Orbiter.

[ascl:1505.029] fits2hdf: FITS to HDFITS conversion

fits2hdf ports FITS files to Hierarchical Data Format (HDF5) files in the HDFITS format. HDFITS allows faster reading of data, higher compression ratios, and higher throughput. HDFITS formatted data can be presented transparently as an in-memory FITS equivalent by changing the import lines in Python-based FITS utilities. fits2hdf includes a utility to port MeasurementSets (MS) to HDF5 files.

[ascl:1710.018] FITSFH: Star Formation Histories

FITSFH derives star formation histories from photometry of resolved stellar populations by populating theoretical isochrones according to a chosen stellar initial mass function (IMF) and searching for the linear combination of isochrones with different ages and metallicities that best matches the data. In comparing the synthetic and real data, observational errors and incompleteness are taken into account, and a rudimentary treatment of the effect of unresolved binaries is also implemented. The code also allows for an age-dependent range of extinction values to be included in the modelling.

[ascl:1111.014] FITSH: Software Package for Image Processing

FITSH provides a standalone environment for analysis of data acquired by imaging astronomical detectors. The package provides utilities both for the full pipeline of subsequent related data processing steps (including image calibration, astrometry, source identification, photometry, differential analysis, low-level arithmetic operations, multiple image combinations, spatial transformations and interpolations, etc.) and for aiding the interpretation of the (mainly photometric and/or astrometric) results. The package also features a consistent implementation of photometry based on image subtraction, point spread function fitting and aperture photometry and provides easy-to-use interfaces for comparisons and for picking the most suitable method for a particular problem. The utilities in the package are built on the top of the commonly used UNIX/POSIX shells (hence the name of the package), therefore both frequently used and well-documented tools for such environments can be exploited and managing massive amount of data is rather convenient.

[ascl:1107.003] FITSManager: Management of Personal Astronomical Data

With the increase of personal storage capacity, it is easy to find hundreds to thousands of FITS files in the personal computer of an astrophysicist. Because Flexible Image Transport System (FITS) is a professional data format initiated by astronomers and used mainly in the small community, data management toolkits for FITS files are very few. Astronomers need a powerful tool to help them manage their local astronomical data. Although Virtual Observatory (VO) is a network oriented astronomical research environment, its applications and related technologies provide useful solutions to enhance the management and utilization of astronomical data hosted in an astronomer's personal computer. FITSManager is such a tool to provide astronomers an efficient management and utilization of their local data, bringing VO to astronomers in a seamless and transparent way. FITSManager provides fruitful functions for FITS file management, like thumbnail, preview, type dependent icons, header keyword indexing and search, collaborated working with other tools and online services, and so on. The development of the FITSManager is an effort to fill the gap between management and analysis of astronomical data.

[ascl:1905.012] Fitsverify: FITS file format-verification tool

Fitsverify rigorously checks whether a FITS (Flexible Image Transport System) data file conforms to the requirements defined in Version 3.0 of the FITS Standard document; it is a standalone version of the ftverify and fverify tasks that are distributed as part of the ftools (ascl:9912.002) software package. The source code must be compiled and linked with the CFITSIO (ascl:1010.001) library. An interactive web is also available that can verify the format of any FITS data file on a local computer or on the Web.

[ascl:1709.011] FLaapLUC: Fermi-LAT automatic aperture photometry light curve

Most high energy sources detected with Fermi-LAT are blazars, which are highly variable sources. High cadence long-term monitoring simultaneously at different wavelengths being prohibitive, the study of their transient activities can help shed light on our understanding of these objects. The early detection of such potentially fast transient events is the key for triggering follow-up observations at other wavelengths. FLaapLUC (Fermi-LAT automatic aperture photometry Light C↔Urve) uses the simple aperture photometry approach to effectively detect relative flux variations in a set of predefined sources and alert potential users. Such alerts can then be used to trigger observations of these sources with other facilities. The FLaapLUC pipeline is built on top of the Science Tools provided by the Fermi-LAT collaboration and quickly generates short- or long-term Fermi-LAT light curves.

[ascl:1710.007] FLAG: Exact Fourier-Laguerre transform on the ball

FLAG is a fast implementation of the Fourier-Laguerre Transform, a novel 3D transform exploiting an exact quadrature rule of the ball to construct an exact harmonic transform in 3D spherical coordinates. The angular part of the Fourier-Laguerre transform uses the MW sampling theorem and the exact spherical harmonic transform implemented in the SSHT code. The radial sampling scheme arises from an exact quadrature of the radial half-line using damped Laguerre polynomials. The radial transform can in fact be used to compute the spherical Bessel transform exactly, and the Fourier-Laguerre transform is thus closely related to the Fourier-Bessel transform.

[ascl:1112.007] FLAGCAL: FLAGging and CALlibration Pipeline for GMRT Data

FLAGging and CALlibration (FLAGCAL) is a software pipeline developed for automatic flagging and calibration of the GMRT data. This pipeline can be used for preprocessing (before importing the data in AIPS) any other interferromteric data also (given that the data file is in FITS format and contains multiple channels & scans).There are also a few GUI based tools which can be used for quick visualization of the data.

[ascl:1811.007] Flame: Near-infrared and optical spectroscopy data reduction pipeline

Flame reduces near-infrared and optical multi-object spectroscopic data. Although the pipeline was created for the LUCI instrument at the Large Binocular Telescope, Flame, written in IDL, is modular and can be adapted to work with data from other instruments. The software uses 2D transformations, thus using one interpolation step to wavelength calibrate and rectify the data. The γ(x, y) transformation also includes the spatial misalignment between frames, which can be measured from a reference star observed simultaneously with the science targets; sky subtraction can be performed via nodding and/or modelling of the sky spectrum.

[ascl:1010.082] FLASH: Adaptive Mesh Hydrodynamics Code for Modeling Astrophysical Thermonuclear Flashes

The FLASH code, currently in its 4th version, is a publicly available high performance application code which has evolved into a modular, extensible software system from a collection of unconnected legacy codes. FLASH consists of inter-operable modules that can be combined to generate different applications. The FLASH architecture allows arbitrarily many alternative implementations of its components to co-exist and interchange with each other. A simple and elegant mechanism exists for customization of code functionality without the need to modify the core implementation of the source. A built-in unit test framework combined with regression tests that run nightly on multiple platforms verify the code.

[ascl:1606.015] FLASK: Full-sky Lognormal Astro-fields Simulation Kit

FLASK (Full-sky Lognormal Astro-fields Simulation Kit) makes tomographic realizations on the sphere of an arbitrary number of correlated lognormal or Gaussian random fields; it can create joint simulations of clustering and lensing with sub-per-cent accuracy over relevant angular scales and redshift ranges. It is C++ code parallelized with OpenMP; FLASK generates fast full-sky simulations of cosmological large-scale structure observables such as multiple matter density tracers (galaxies, quasars, dark matter haloes), CMB temperature anisotropies and weak lensing convergence and shear fields. The mutiple fields can be generated tomographically in an arbitrary number of redshift slices and all their statistical properties (including cross-correlations) are determined by the angular power spectra supplied as input and the multivariate lognormal (or Gaussian) distribution assumed for the fields. Effects like redshift space distortions, doppler distortions, magnification biases, evolution and intrinsic aligments can be introduced in the simulations via the input power spectra which must be supplied by the user.

[ascl:1612.006] flexCE: Flexible one-zone chemical evolution code

flexCE (flexible Chemical Evolution) computes the evolution of a one-zone chemical evolution model with inflow and outflow in which gas is instantaneously and completely mixed. It can be used to demonstrate the sensitivity of chemical evolution models to parameter variations, show the effect of CCSN yields on chemical evolution models, and reproduce the 2D distribution in [O/Fe]{[Fe/H] by mixing models with a range of inflow and outflow histories. It can also post-process cosmological simulations to predict element distributions.

[ascl:1107.004] Flexible DM-NRG

This code combines the spectral sum-conserving methods of Weichselbaum and von Delft and of Peters, Pruschke and Anders (both relying upon the complete basis set construction of Anders and Schiller) with the use of non-Abelian symmetries in a flexible manner: Essentially any non-Abelian symmetry can be taught to the code, and any number of such symmetries can be used throughout the computation for any density of states, and to compute any local operators' correlation function's real and imaginary parts or any thermodynamical expectation value. The code works both at zero and finite temperatures.

[ascl:1205.006] Flexion: IDL code for calculating gravitational flexion

Gravitational flexion is a technique for measuring 2nd order gravitational lensing signals in background galaxies and radio lobes. Unlike shear, flexion directly probes variations of the potential field. Moreover, the information contained in flexion is orthogonal to what is found in the shear. Thus, we get the information "for free."

[ascl:1411.016] Flicker: Mean stellar densities from flicker

Flicker calculates the mean stellar density of a star by inputting the flicker observed in a photometric time series. Written in Fortran90, its output may be used as an informative prior on stellar density when fitting transit light curves.

[ascl:1210.007] FLUKA: Fully integrated particle physics Monte Carlo simulation package

FLUKA (FLUktuierende KAskade) is a general-purpose tool for calculations of particle transport and interactions with matter. FLUKA can simulate with high accuracy the interaction and propagation in matter of about 60 different particles, including photons and electrons from 1 keV to thousands of TeV, neutrinos, muons of any energy, hadrons of energies up to 20 TeV (up to 10 PeV by linking FLUKA with the DPMJET code) and all the corresponding antiparticles, neutrons down to thermal energies and heavy ions. The program, written in Fortran, can also transport polarised photons (e.g., synchrotron radiation) and optical photons. Time evolution and tracking of emitted radiation from unstable residual nuclei can be performed online.

[ascl:1105.008] Flux Tube Model

This Fortran code computes magnetohydrostatic flux tubes and sheets according to the method of Steiner, Pneuman, & Stenflo (1986) A&A 170, 126-137. The code has many parameters contained in one input file that are easily modified. Extensive documentation is provided in README files.

[ascl:1712.010] Flux Tube: Solar model

Flux Tube is a nonlinear, two-dimensional, numerical simulation of magneto-acoustic wave propagation in the photosphere and chromosphere of small-scale flux tubes with internal structure. Waves with realistic periods of three to five minutes are studied, after horizontal and vertical oscillatory perturbations are applied to the equilibrium model. Spurious reflections of shock waves from the upper boundary are minimized by a special boundary condition.

[ascl:1405.010] FLUXES: Position and flux density of planets

FLUXES calculates approximate topocentric positions of the planets and also integrated flux densities of five of them at several wavelengths. These provide calibration information at the effective frequencies and beam-sizes employed by the UKT14, SCUBA and SCUBA-2 receivers on the JCMT telescope based on Mauna Kea, Hawaii. FLUXES is part of the bundle that comprises the Starlink multi-purpose astronomy software package (ascl:1110.012).

[ascl:1011.019] FLY: MPI-2 High Resolution code for LSS Cosmological Simulations

Cosmological simulations of structures and galaxies formations have played a fundamental role in the study of the origin, formation and evolution of the Universe. These studies improved enormously with the use of supercomputers and parallel systems and, recently, grid based systems and Linux clusters. Now we present the new version of the tree N-body parallel code FLY that runs on a PC Linux Cluster using the one side communication paradigm MPI-2 and we show the performances obtained. FLY is included in the Computer Physics Communication Program Library. This new version was developed using the Linux Cluster of CINECA, an IBM Cluster with 1024 Intel Xeon Pentium IV 3.0 Ghz. The results show that it is possible to run a 64 Million particle simulation in less than 15 minutes for each timestep, and the code scalability with the number of processors is achieved. This lead us to propose FLY as a code to run very large N-Body simulations with more than $10^{9}$ particles with the higher resolution of a pure tree code.

[ascl:1701.007] Forecaster: Mass and radii of planets predictor

Forecaster predicts the mass (or radius) from the radius (or mass) for objects covering nine orders-of-magnitude in mass. It is an unbiased forecasting model built upon a probabilistic mass-radius relation conditioned on a sample of 316 well-constrained objects. It accounts for observational errors, hyper-parameter uncertainties and the intrinsic dispersions observed in the calibration sample.

[ascl:1904.011] FortesFit: Flexible spectral energy distribution modelling with a Bayesian backbone

FortesFit efficiently explores and discriminates between various spectral energy distributions (SED) models of astronomical sources. The Python package adds Bayesian inference to a framework that is designed for the easy incorporation and relative assessment of SED models, various fitting engines, and a powerful treatment of priors, especially those that may arise from non-traditional wave-bands such as the X-ray or radio emission, or from spectroscopic measurements. It has been designed with particular emphasis for its scalability to large datasets and surveys.

[ascl:1405.007] FORWARD: Forward modeling of coronal observables

FORWARD forward models various coronal observables and can access and compare existing data. Given a coronal model, it can produce many different synthetic observables (including Stokes polarimetry), as well as plots of model plasma properties (density, magnetic field, etc.). It uses the CHIANTI database (ascl:9911.004) and CLE polarimetry synthesis code, works with numerical model datacubes, interfaces with the PFSS module of SolarSoft (ascl:1208.013), includes several analytic models, and connects to the Virtual Solar Observatory for downloading data in a format directly comparable to model predictions.

[ascl:1204.004] Fosite: 2D advection problem solver

Fosite implements a method for the solution of hyperbolic conservation laws in curvilinear orthogonal coordinates. It is written in Fortran 90/95 integrating object-oriented (OO) design patterns, incorporating the flexibility of OO-programming into Fortran 90/95 while preserving the efficiency of the numerical computation. Although mainly intended for CFD simulations, Fosite's modular design allows its application to other advection problems as well. Unlike other two-dimensional implementations of finite volume methods, it accounts for local conservation of specific angular momentum. This feature turns the program into a perfect tool for astrophysical simulations where angular momentum transport is crucial. Angular momentum transport is not only implemented for standard coordinate systems with rotational symmetry (i.e. cylindrical, spherical) but also for a general set of orthogonal coordinate systems allowing the use of exotic curvilinear meshes (e.g. oblate-spheroidal). As in the case of the advection problem, this part of the software is also kept modular, therefore new geometries may be incorporated into the framework in a straightforward manner.

[ascl:1610.012] Fourierdimredn: Fourier dimensionality reduction model for interferometric imaging

Fourierdimredn (Fourier dimensionality reduction) implements Fourier-based dimensionality reduction of interferometric data. Written in Matlab, it derives the theoretically optimal dimensionality reduction operator from a singular value decomposition perspective of the measurement operator. Fourierdimredn ensures a fast implementation of the full measurement operator and also preserves the i.i.d. Gaussian properties of the original measurement noise.

[ascl:1806.030] foxi: Forecast Observations and their eXpected Information

Using information theory and Bayesian inference, the foxi Python package computes a suite of expected utilities given futuristic observations in a flexible and user-friendly way. foxi requires a set of n-dim prior samples for each model and one set of n-dim samples from the current data, and can calculate the expected ln-Bayes factor between models, decisiveness between models and its maximum-likelihood averaged equivalent, the decisivity, and the expected Kullback-Leibler divergence (i.e., the expected information gain of the futuristic dataset). The package offers flexible inputs and is designed for all-in-one script calculation or an initial cluster run then local machine post-processing, which should make large jobs quite manageable subject to resources and includes features such as LaTeX tables and plot-making for post-data analysis visuals and convenience of presentation.

[ascl:1010.002] fpack: FITS Image Compression Program

fpack is a utility program for optimally compressing images in the FITS data format. The associated funpack program will restore the compressed file back to its original state. These programs may be run from the host operating system command line and are analogous to the gzip and gunzip utility programs, except that they are specifically optimized for FITS format images and offer a wider choice of compression options.

fpack uses the tiled image compression convention for storing the compressed images. This convention can in principle support any number of of different compression algorithms; currently GZIP, Rice, Hcompress, and the IRAF pixel list compression algorithms have been implemented.

The main advantages of fpack compared to the commonly used technique of externally compressing the whole FITS file with gzip are:

  1. It is generally faster and offers better compression than gzip.
  2. The FITS header keywords remain uncompressed for fast access.
  3. Each HDU of a multi-extension FITS file is compressed separately, so it is not necessary to uncompress the entire file to read a single image in a multi-extension file.
  4. Dividing the image into tiles before compression enables faster access to small subsections of the image.
  5. The compressed image is itself a valid FITS file and can be manipulated by other general FITS utility software.
  6. Lossy compression can be used for much higher compression in cases where it is not necessary to exactly preserve the original image.
  7. The CHECKSUM keywords are automatically updated to help verify the integrity of the files.
  8. Software that supports the tiled image compression technique can directly read and write the FITS images in their compressed form.

[ascl:1610.014] Freddi: Fast Rise Exponential Decay accretion Disk model Implementation

Freddi (Fast Rise Exponential Decay: accretion Disk model Implementation) solves 1-D evolution equations of the Shakura-Sunyaev accretion disk. It simulates fast rise exponential decay (FRED) light curves of low mass X-ray binaries (LMXBs). The basic equation of the viscous evolution relates the surface density and viscous stresses and is of diffusion type; evolution of the accretion rate can be found on solving the equation. The distribution of viscous stresses defines the emission from the source. The standard model for the accretion disk is implied; the inner boundary of the disk is at the ISCO or can be explicitely set. The boundary conditions in the disk are the zero stress at the inner boundary and the zero accretion rate at the outer boundary. The conditions are suitable during the outbursts in X-ray binary transients with black holes. In a binary system, the accretion disk is radially confined. In Freddi, the outer radius of the disk can be set explicitely or calculated as the position of the tidal truncation radius.

[ascl:1211.002] FreeEOS: Equation of State for stellar interiors calculations

FreeEOS is a Fortran library for rapidly calculating the equation of state using an efficient free-energy minimization technique that is suitable for physical conditions in stellar interiors. Converged FreeEOS solutions can be reliably determined for the first time for physical conditions occurring in stellar models with masses between 0.1 M and the hydrogen-burning limit near 0.07 M and hot brown-dwarf models just below that limit. However, an initial survey of results for those conditions showed EOS discontinuities (plasma phase transitions) and other problems which will need to be addressed in future work by adjusting the interaction radii characterizing the pressure ionization used for the FreeEOS calculations.

[ascl:1508.004] FRELLED: FITS Realtime Explorer of Low Latency in Every Dimension

FRELLED (FITS Realtime Explorer of Low Latency in Every Dimension) creates 3D images in real time from 3D FITS files and is written in Python for the 3D graphics suite Blender. Users can interactively generate masks around regions of arbitrary geometry and use them to catalog sources, hide regions, and perform basic analysis (e.g., image statistics within the selected region, generate contour plots, query NED and the SDSS). World coordinates are supported and multi-volume rendering is possible. FRELLED is designed for viewing HI data cubes and provides a number of tasks to commonly-used MIRIAD (ascl:1106.007) tasks (e.g. mbspect); however, many of its features are suitable for any type of data set. It also includes an n-body particle viewer with the ability to display 3D vector information as well as the ability to render time series movies of multiple FITS files and setup simple turntable rotation movies for single files.

[ascl:1406.006] FROG: Time-series analysis

FROG performs time series analysis and display. It provides a simple user interface for astronomers wanting to do time-domain astrophysics but still offers the powerful features found in packages such as PERIOD (ascl:1406.005). FROG includes a number of tools for manipulation of time series. Among other things, the user can combine individual time series, detrend series (multiple methods) and perform basic arithmetic functions. The data can also be exported directly into the TOPCAT (ascl:1101.010) application for further manipulation if needed.

[ascl:1506.006] fsclean: Faraday Synthesis CLEAN imager

Fsclean produces 3D Faraday spectra using the Faraday synthesis method, transforming directly from multi-frequency visibility data to the Faraday depth-sky plane space. Deconvolution is accomplished using the CLEAN algorithm, and the package includes Clark and Högbom style CLEAN algorithms. Fsclean reads in MeasurementSet visibility data and produces HDF5 formatted images; it handles images and data of arbitrary size, using scratch HDF5 files as buffers for data that is not being immediately processed, and is limited only by available disk space.

[ascl:1710.012] FSFE: Fake Spectra Flux Extractor

The fake spectra flux extractor generates simulated quasar absorption spectra from a particle or adaptive mesh-based hydrodynamic simulation. It is implemented as a python module. It can produce both hydrogen and metal line spectra, if the simulation includes metals. The cloudy table for metal ionization fractions is included. Unlike earlier spectral generation codes, it produces absorption from each particle close to the sight-line individually, rather than first producing an average density in each spectral pixel, thus substantially preserving more of the small-scale velocity structure of the gas. The code supports both Gadget (ascl:0003.001) and AREPO.

[ascl:1010.043] FSPS: Flexible Stellar Population Synthesis

FSPS is a flexible SPS package that allows the user to compute simple stellar populations (SSPs) for a range of IMFs and metallicities, and for a variety of assumptions regarding the morphology of the horizontal branch, the blue straggler population, the post--AGB phase, and the location in the HR diagram of the TP-AGB phase. From these SSPs the user may then generate composite stellar populations (CSPs) for a variety of star formation histories (SFHs) and dust attenuation prescriptions. Outputs include the "observed" spectra and magnitudes of the SSPs and CSPs at arbitrary redshift. In addition to these fortran routines, several IDL routines are provided that allow easy manipulation of the output. FSPS was designed with the intention that the user would make full use of the provided fortran routines. However, the full FSPS package is quite large, and requires some time for the user to become familiar with all of the options and syntax. Some users may only need SSPs for a range of metallicities and IMFs. For such users, standard SSP sets for several IMFs, evolutionary tracks, and spectral libraries are available here.

[ascl:1711.003] FTbg: Background removal using Fourier Transform

FTbg performs Fourier transforms on FITS images and separates low- and high-spatial frequency components by a user-specified cut. Both components are then inverse Fourier transformed back to image domain. FTbg can remove large-scale background/foreground emission in many astrophysical applications. FTbg has been designed to identify and remove Galactic background emission in Herschel/Hi-GAL continuum images, but it is applicable to any other (e.g., Planck) images when background/foreground emission is a concern.

[ascl:9912.002] FTOOLS: A general package of software to manipulate FITS files

FTOOLS, a highly modular collection of utilities for processing and analyzing data in the FITS (Flexible Image Transport System) format, has been developed in support of the HEASARC (High Energy Astrophysics Research Archive Center) at NASA's Goddard Space Flight Center. The FTOOLS package contains many utility programs which perform modular tasks on any FITS image or table, as well as higher-level analysis programs designed specifically for data from current and past high energy astrophysics missions. The utility programs for FITS tables are especially rich and powerful, and provide functions for presentation of file contents, extraction of specific rows or columns, appending or merging tables, binning values in a column or selecting subsets of rows based on a boolean expression. Individual FTOOLS programs can easily be chained together in scripts to achieve more complex operations such as the generation and displaying of spectra or light curves. FTOOLS development began in 1991 and has produced the main set of data analysis software for the current ASCA and RXTE space missions and for other archival sets of X-ray and gamma-ray data. The FTOOLS software package is supported on most UNIX platforms and on Windows machines. The user interface is controlled by standard parameter files that are very similar to those used by IRAF. The package is self documenting through a stand alone help task called fhelp. Software is written in ANSI C and FORTRAN to provide portability across most computer systems. The data format dependencies between hardware platforms are isolated through the FITSIO library package.

[ascl:1112.002] Funtools: FITS Users Need Tools

Funtools is a "minimal buy-in" FITS library and utility package developed at the the High Energy Astrophysics Division of SAO. The Funtools library provides simplified access to a wide array of file types: standard astronomical FITS images and binary tables, raw arrays and binary event lists, and even tables of ASCII column data. A sophisticated region filtering library (compatible with ds9) filters images and tables using boolean operations between geometric shapes, support world coordinates, etc. Funtools also supports advanced capabilities such as optimized data searching using index files.

Because Funtools consists of a library and a set of user programs, it is most appropriately built from source. Funtools has been ported to Solaris, Linux, LinuxPPC, SGI, Alpha OSF1, Mac OSX (darwin) and Windows 98/NT/2000/XP. Once the source code tar file is retrieved, Funtools can be built and installed easily using standard commands.

[ascl:1205.005] Fv: Interactive FITS file editor

Fv is an easy-to-use graphical program for viewing and editing any FITS format image or table. The Fv software is small, completely self-contained and runs on Windows PCs, most Unix platforms and Mac OS-X. Fv also provides a portal into the Hera data analysis service from the HEASARC.

Would you like to view a random code?